SNP Profiles of NA 232 View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CT	AC	TT	CC	GG	TT	AA	CC	CC	GG	GG	CC	AA	GG
1._RUQ_1504	_	_	_	_	_	_	_	CC	_	_	_	_	_	GG
2._RUQ_1504	_	_	_	_	_	_	_	CC	_	_	_	_	_	_
3._RUQ_1504	_	_	_	_	_	_	_	CC	_	_	_	_	_	GG
4._MITC-000043	_	_	_	_	_	_	_	CC	_	_	_	_	_	GG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AC	CC	AC	CT	CC	AA	GG	AA	AA	CC	CC	AA	CC	AA
1._RUQ_1504	_	_	_	_	CC	_	GG	_	AA	CC	_	_	_	_
2._RUQ_1504	_	_	_	_	_	_	GG	_	AA	CC	_	_	_	_
3._RUQ_1504	_	_	_	_	CC	_	GG	_	AA	GG	_	_	_	_
4._MITC-000043	_	_	_	_	CC	_	GG	_	AA	GG	_	_	_	_

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CG	TT	GG	GG	TT	TT	AC	AT	TT	GG	GG	CG	AG	CC
1._RUQ_1504	_	TT	GG	GG	_	_	AC	_	_	GG	-	_	AG	CC
2._RUQ_1504	_	_	_	_	_	_	_	_	_	CC	_	_	_	_
3._RUQ_1504	_	_	CC	GG	_	_	AC	_	CC	CC	GG	_	AG	_
4._MITC-000043	_	_	CC	GG	_	_	AC	_	CC	CC	GG	_	AG	_

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	TT	AA	CC	AG	CT	CC	GG	AA	TT	GT	AA	AG	GG	CC
1._RUQ_1504	_	_	_	_	_	_	_	_	TT	_	_	_	_	CC
2._RUQ_1504	_	_	_	_	_	_	_	_	_	_	_	_	_	GG
3._RUQ_1504	_	_	_	AG	_	_	_	_	AA	_	_	_	_	GG
4._MITC-000043	_	_	_	AG	_	_	_	_	AA	_	_	_	_	GG

	57	58
_Input profile	TT	AA	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_1504	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._RUQ_1504	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._RUQ_1504	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._MITC-000043	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: NA_232 RUQ_1504

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

1._NA_232 RUQ_1504

identical
15 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._NA_232 RUQ_1504

66.7 %
6 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Location: GBR207

Jocelyn De Wever et al., 2019

3._NA_232 RUQ_1504

62.5 %
16 shared markers

View View all Clone Any

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Mars, 2018

4._NA_232 MITC-000043

62.5 %
16 shared markers

View View all Clone Any

USDA-SHRS, United States of America

Mars, 2018

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP33	4	TcSNP49	5	TcSNP52
6	TcSNP131	7	TcSNP143	8	TcSNP144	9	TcSNP176	10	TcSNP189
11	TcSNP194	12	TcSNP290	13	TcSNP305	14	TcSNP329	15	TcSNP363
16	TcSNP421	17	TcSNP519	18	TcSNP522	19	TcSNP529	20	TcSNP546
21	TcSNP577	22	TcSNP589	23	TcSNP591	24	TcSNP602	25	TcSNP640
26	TcSNP642	27	TcSNP644	28	TcSNP645	29	TcSNP660	30	TcSNP702
31	TcSNP723	32	TcSNP731	33	TcSNP739	34	TcSNP800	35	TcSNP823
36	TcSNP835	37	TcSNP836	38	TcSNP872	39	TcSNP899	40	TcSNP945
41	TcSNP998	42	TcSNP999	43	TcSNP1010	44	TcSNP1019	45	TcSNP1053
46	TcSNP1062	47	TcSNP1112	48	TcSNP1144	49	TcSNP1205	50	TcSNP1230
51	TcSNP1253	52	TcSNP1275	53	TcSNP1293	54	TcSNP1401	55	TcSNP1404
56	TcSNP1458	57	TcSNP1524	58	TcSNP1527

SNP Profiles of NA 232 View Data

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Input profile: NA_232 RUQ_1504

1._NA_232 RUQ_1504

identical 15 shared markers

2._NA_232 RUQ_1504

66.7 % 6 shared markers

3._NA_232 RUQ_1504

62.5 % 16 shared markers

4._NA_232 MITC-000043

62.5 % 16 shared markers

identical
15 shared markers

66.7 %
6 shared markers

62.5 %
16 shared markers

62.5 %
16 shared markers